Guide for Contributing to Cyclus

Cyclus has a number of projects under its umbrella. The core Cyclus project repository is located at Additional projects found at include :

  • Cycamore, the Cyclus additional module repository
  • Cycic, the Cyclus input controller
  • and more to come.

Although you do not have to register with GitHub to download and edit the code, if you desire your work to be integrated into the Cyclus mainline of development you must fork the cyclus core repository into your own GitHub account and submit ‘Pull Requests’. Here is a tutorial on getting and building cyclus.

Working on a Topic

Note that “upstream” repository refers to the primary `cyclus/cyclus` repository.

You may find or create an issue report in a Cyclus repository that you would like to solve.

You’ll first need to fork your repository and create a branch for the topic you’d like you solve. As you do your development, push only to your own fork. Make a pull request to the upstream repository (usually the “develop” branch) only after:

  • You have pulled the latest changes from the upstream repository.
  • You have completed a logical set of changes.
  • Cyclus compiles with no errors.
  • All tests pass.
  • Cyclus input files run as expected.
  • Your code has been reviewed by another developer.

Code from the “develop” branch generally must pass even more rigorous checks before being integrated into the “master” branch. Hotfixes would be a possible exception to this.

Keeping Your Fork Up To Date

  • Use a branching workflow similar to the one described at

  • The “develop” branch is how Cyclus developers will share (generally compilable) progress when we are not yet ready for the code to become ‘production’.

  • Keep your own “master” and “develop” branches in sync with the upstream repository’s “master” and “develop” branches. The master branch should always be the ‘stable’ or ‘production’ release of Cyclus.

    • Pull the most recent history from the upstream repository “master” and/or “develop” branches before you merge changes into your corresponding local branch. Consider doing a rebase pull instead of a regular pull or ‘fetch and merge’. For example:

      git checkout develop
      git pull --rebase upstream develop
  • As you do development on topic branches in your own fork, consider rebasing the topic branch onto the “master” and/or “develop” branches after pulls from the upstream repository rather than merging the pulled changes into your branch. This will help maintain a more linear (and clean) history. Please see caution about rebasing below. For example:

    git checkout [your topic branch]
    git rebase develop

Passing Tests

To check that your branch passes the tests, you must build and install your topic branch and then run the tests built during that process.

For the Cyclus core, the tests are run using the CyclusUnitTestDriver (at the moment, `make test` is insufficient). For example

mkdir build
mkdir install
cd build
cmake ../src -DCMAKE_INSTALL_PREFIX=../install
make install

In Cycamore, the additional module repository, the tests are run in an exactly analogous way, but using the CycamoreUnitTestDriver. For example

mkdir build
mkdir install
cd build
cmake ../src -DCMAKE_INSTALL_PREFIX=../install
make install

In addition to the CycamoreUnitTestDriver, a suite of input files can be run and tested using the script that is configured, built, and installed with Cycamore. It relies on the input files that are part of your Cycamore repository, and only succeeds for input files that are correct (some may have known issues. See the issue list in Cycamore for details.) To run the example input files,

python ../install/cycamore/bin/

Making a Pull Request

When you are ready to move changes from one of your topic branches into the “develop” branch, it must be reviewed and accepted by another developer.

  • You may want to review this tutorial before you make a pull request to the develop branch.

Sometimes, your pull request will be closed by the reviewer until further changes are made to appease the reviewer’s concerns. This may be frustrating, but please act rationally, discuss the issues on the GitHub space made for your pull request, consult the style guide <style_guide>, email the developer listhost for further advice, and make changes to your topic branch accordingly. The pull request will be updated with those changes when you push them to your fork. When you think your request is ready for another review, you can reopen the review yourself with the button made available to you.

Reviewing a Pull Request

  • Build, install, and test it. If you have added the remote repository as a remote you can check it out and merge it with the current develop branch thusly,

    git checkout -b remote_name/branch_name
    git merge develop
  • Look over the code. The next page <pr_review> details what to look for while reviewing.)

  • Accept the Pull Request

    • In general, every commit (notice this is not ‘every push’) to the “develop” and “master” branches should compile and pass tests. This is guaranteed by using a NON-fast-forward merge during the pull request acceptance process.

    • The green “Merge Pull Request” button does a non-fast-forward merge by default. However, if that button is unavailable, you’ve made minor local changes to the pulled branch, or you just want to do it from the command line, make sure your merge is a non-fast-forward merge. For example:

      git checkout develop
      git merge --no-ff remote_name/branch_name -m "A message""

Keeping Cyclus Stable

A goal of cyclus is to keep the API stable for every major version. If you ever need to check whether the curent cyclus is stable or not simply go into the release directory and run the following command.

$ cd cyclus/release
$ ./ --update -t HEAD --no-save --check

If cyclus is stable, it will tell you so. If cyclus is not stable it will print a diff that lets you know where the instabilities lie. These are given by the minuses (-) of the diff. Stability in this context means that it is OK to add things to the API, but not remove them. For various reasons as documented in the tool itself, this is only availble on posix platforms.

See also

A good description of a git workflow with good graphics is available at